tlpipe
Introduction
Installation
Python version
Prerequisites
Installation guide
Tutorial
Prepare for the input pipe file
Non-iterative pipeline
Iterative pipeline
Non-trivial control flow
Execute several times a same task
Save intermediate data
Recovery from intermediate data
Run the pipeline
Single process run
Multiple processes run
Pipeline products and intermediate results
Other excutable commands
Developer’s guide
Write a general task
Write a task to process timestream data
Use data operate functions in timestream tasks
core
– Core functionalities
Constants
tlpipe.core.constants
Constants
Tianlai array model
tlpipe.core.tl_array
Inheritance diagram
kiyopy
– Kiyoshi Masui’s paramter parsing package
Pameter parser
tlpipe.kiyopy.parse_ini
tlpipe.kiyopy.parse_ini.parse
tlpipe.kiyopy.parse_ini.parse_dict
tlpipe.kiyopy.parse_ini.write_params
Custom exceptions
tlpipe.kiyopy.custom_exceptions
tlpipe.kiyopy.custom_exceptions.DataError
tlpipe.kiyopy.custom_exceptions.FileParameterTypeError
tlpipe.kiyopy.custom_exceptions.NextIteration
tlpipe.kiyopy.custom_exceptions.ParameterFileError
Utilities
tlpipe.kiyopy.utils
tlpipe.kiyopy.utils.abbreviate_file_path
tlpipe.kiyopy.utils.mkdir_p
tlpipe.kiyopy.utils.mkparents
pipeline
– Pipeline control and tasks
Pipeline
tlpipe.pipeline.pipeline
Basic Tasks
Pipeline Configuration
Execution Order
Advanced Tasks
Inheritance diagram
container
– Timestream data containers
Data containers
tlpipe.container.container
tlpipe.container.container.check_axis
tlpipe.container.container.deepcopy
tlpipe.container.container.ensure_file_list
tlpipe.container.container.BasicTod
tlpipe.container.timestream_common
Inheritance diagram
tlpipe.container.raw_timestream
Inheritance diagram
tlpipe.container.timestream
Inheritance diagram
timestream
– Timestream operating tasks
Timestream base task
tlpipe.timestream.timestream_task
Inheritance diagram
Operating tasks
tlpipe.timestream.dispatch
Inheritance diagram
tlpipe.timestream.detect_ns
Inheritance diagram
tlpipe.timestream.rfi_flagging
Inheritance diagram
tlpipe.timestream.line_rfi
Inheritance diagram
tlpipe.timestream.time_flag
Inheritance diagram
tlpipe.timestream.freq_flag
Inheritance diagram
tlpipe.timestream.multiscale_flag
Inheritance diagram
tlpipe.timestream.combine_mask
Inheritance diagram
tlpipe.timestream.sir_operate
Inheritance diagram
tlpipe.timestream.rfi_stats
Inheritance diagram
tlpipe.timestream.subdata
Inheritance diagram
tlpipe.timestream.bad_detect
Inheritance diagram
tlpipe.timestream.delay_transform
Inheritance diagram
tlpipe.timestream.ns_cal
Inheritance diagram
tlpipe.timestream.rt2ts
Inheritance diagram
tlpipe.timestream.ps_fit
Inheritance diagram
tlpipe.timestream.ps_cal
Inheritance diagram
tlpipe.timestream.apply_gain
Inheritance diagram
tlpipe.timestream.temperature_convert
Inheritance diagram
tlpipe.timestream.phs2src
Inheritance diagram
tlpipe.timestream.phs2zen
Inheritance diagram
tlpipe.timestream.phase_closure
Inheritance diagram
tlpipe.timestream.ps_subtract
Inheritance diagram
tlpipe.timestream.daytime_mask
Inheritance diagram
tlpipe.timestream.re_order
Inheritance diagram
tlpipe.timestream.accumulate
Inheritance diagram
tlpipe.timestream.barrier
Inheritance diagram
tlpipe.timestream.average
Inheritance diagram
tlpipe.timestream.freq_rebin
Inheritance diagram
tlpipe.timestream.map_making
Inheritance diagram
rfi
– RFI flagging methods
Surface fitting methods
tlpipe.rfi.surface_fit
tlpipe.rfi.surface_fit.SurfaceFitMethod
tlpipe.rfi.local_fit
Inheritance diagram
tlpipe.rfi.local_average_fit
Inheritance diagram
tlpipe.rfi.local_median_fit
Inheritance diagram
tlpipe.rfi.local_minimum_fit
Inheritance diagram
tlpipe.rfi.gaussian_filter
Inheritance diagram
tlpipe.rfi.interpolate
Inheritance diagram
Combinatorial thresholding methods
tlpipe.rfi.combinatorial_threshold
tlpipe.rfi.combinatorial_threshold.winsorized_mean_and_std
tlpipe.rfi.combinatorial_threshold.winsorized_mode
tlpipe.rfi.combinatorial_threshold.CombinatorialThreshold
tlpipe.rfi.var_threshold
Inheritance diagram
tlpipe.rfi.sum_threshold
Inheritance diagram
Mathematical morphological methods
tlpipe.rfi.dilate_operator
tlpipe.rfi.dilate_operator.dilate1d
tlpipe.rfi.dilate_operator.horizontal_dilate
tlpipe.rfi.dilate_operator.vertical_dilate
tlpipe.rfi.sir_operator
tlpipe.rfi.sir_operator.horizontal_sir
tlpipe.rfi.sir_operator.sir1d
tlpipe.rfi.sir_operator.vertical_sir
cal
– Calibration
map
– Map-making
Driftscan map-making
foreground
– Foreground subtraction
ps
– Power spectrum estimation
plot
– Tasks for plottting
Plotting tasks
tlpipe.plot.plot_integral
Inheritance diagram
tlpipe.plot.plot_slice
Inheritance diagram
tlpipe.plot.plot_waterfall
Inheritance diagram
tlpipe.plot.plot_phase
Inheritance diagram
utils
– Utility functions
Utilities
tlpipe.utils.date_util
tlpipe.utils.date_util.get_ephdate
tlpipe.utils.date_util.get_juldate
tlpipe.utils.np_util
tlpipe.utils.np_util.average
tlpipe.utils.np_util.unique
tlpipe.utils.path_util
tlpipe.utils.path_util.input_path
tlpipe.utils.path_util.iter_path
tlpipe.utils.path_util.output_path
tlpipe.utils.pickle_util
tlpipe.utils.pickle_util.get_value
tlpipe.utils.robust_stats
tlpipe.utils.robust_stats.MAD
tlpipe.utils.robust_stats.mad
tlpipe.utils.robust_stats.winsorize
tlpipe.utils.robust_stats.winsorized_mean_and_std
tlpipe.utils.robust_stats.winsorized_mode
tlpipe.utils.sg_filter
tlpipe.utils.sg_filter.factorial
tlpipe.utils.sg_filter.savitzky_golay
tlpipe.utils.rpca_decomp
tlpipe.utils.rpca_decomp.MAD
tlpipe.utils.rpca_decomp.decompose
tlpipe.utils.rpca_decomp.l0_norm
tlpipe.utils.rpca_decomp.l1_norm
tlpipe.utils.rpca_decomp.mad
tlpipe.utils.rpca_decomp.shrink
tlpipe.utils.rpca_decomp.sign
tlpipe.utils.rpca_decomp.truncate
tlpipe.utils.multiscale
tlpipe.utils.multiscale.MAD
tlpipe.utils.multiscale.convolve
tlpipe.utils.multiscale.convolve1d
tlpipe.utils.multiscale.median_filter
tlpipe.utils.multiscale.median_wavelet_detrend
tlpipe.utils.multiscale.median_wavelet_smooth
tlpipe.utils.multiscale.median_wavelet_transform
tlpipe.utils.multiscale.multiscale_median_detrend
tlpipe.utils.multiscale.multiscale_median_flag
tlpipe.utils.multiscale.multiscale_median_smooth
tlpipe.utils.multiscale.multiscale_median_transform
tlpipe.utils.multiscale.starlet_detrend
tlpipe.utils.multiscale.starlet_smooth
tlpipe.utils.multiscale.starlet_transform
tlpipe.utils.multiscale.up_sampling
tlpipe.utils.hist_eq
tlpipe.utils.hist_eq.hist_eq
tlpipe
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pipeline
– Pipeline control and tasks
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tlpipe.pipeline.pipeline
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